Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarce1O54941 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.6■□□□□ 0.57
Smarce1O54941 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smarce1O54941 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.6■□□□□ 0.57
Smarce1O54941 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.6■□□□□ 0.57
Smarce1O54941 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarce1O54941 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Smarce1O54941 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smarce1O54941 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Smarce1O54941 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Smarce1O54941 Gm10252-201ENSMUST00000209541 832 ntBASIC18.59■□□□□ 0.57
Smarce1O54941 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.59■□□□□ 0.57
Smarce1O54941 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smarce1O54941 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smarce1O54941 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Smarce1O54941 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.59■□□□□ 0.57
Smarce1O54941 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarce1O54941 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Smarce1O54941 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Smarce1O54941 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarce1O54941 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarce1O54941 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Smarce1O54941 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Smarce1O54941 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.58■□□□□ 0.56
Smarce1O54941 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.58■□□□□ 0.56
Smarce1O54941 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Smarce1O54941 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarce1O54941 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.58■□□□□ 0.56
Smarce1O54941 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Smarce1O54941 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.57■□□□□ 0.56
Smarce1O54941 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.57■□□□□ 0.56
Smarce1O54941 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smarce1O54941 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.57■□□□□ 0.56
Smarce1O54941 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smarce1O54941 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.57■□□□□ 0.56
Smarce1O54941 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.57■□□□□ 0.56
Smarce1O54941 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.57■□□□□ 0.56
Smarce1O54941 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.57■□□□□ 0.56
Smarce1O54941 Gm45328-201ENSMUST00000210942 917 ntBASIC18.57■□□□□ 0.56
Smarce1O54941 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Smarce1O54941 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarce1O54941 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Smarce1O54941 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Smarce1O54941 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Smarce1O54941 BC037039-201ENSMUST00000192003 2205 ntBASIC18.56■□□□□ 0.56
Smarce1O54941 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Gm11950-201ENSMUST00000121615 838 ntBASIC18.56■□□□□ 0.56
Smarce1O54941 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarce1O54941 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms