Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cx3cl1O35188 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.69□□□□□ -0.06
Cx3cl1O35188 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Gm28659-201ENSMUST00000188013 759 ntBASIC14.69□□□□□ -0.06
Cx3cl1O35188 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.69□□□□□ -0.06
Cx3cl1O35188 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cx3cl1O35188 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cl1O35188 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Mir8098-201ENSMUST00000184011 137 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44357-201ENSMUST00000195897 142 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm19658-201ENSMUST00000196231 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44367-201ENSMUST00000196836 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44350-201ENSMUST00000197197 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44390-201ENSMUST00000197533 144 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44313-201ENSMUST00000198018 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44486-201ENSMUST00000198508 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44314-201ENSMUST00000199263 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44394-201ENSMUST00000199558 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44484-201ENSMUST00000199873 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44466-201ENSMUST00000200264 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm44359-201ENSMUST00000200671 138 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm5864-201ENSMUST00000202263 970 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cl1O35188 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Rps4l-201ENSMUST00000071745 943 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.68□□□□□ -0.06
Cx3cl1O35188 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cl1O35188 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cx3cl1O35188 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Gm8097-201ENSMUST00000117903 829 ntBASIC14.67□□□□□ -0.06
Cx3cl1O35188 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.67□□□□□ -0.06
Cx3cl1O35188 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Gm6296-201ENSMUST00000222599 943 ntBASIC14.67□□□□□ -0.06
Cx3cl1O35188 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Cx3cl1O35188 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms