Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16■□□□□ 0.15
Ercc2O08811 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Gm19164-201ENSMUST00000210667 640 ntBASIC16■□□□□ 0.15
Ercc2O08811 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ercc2O08811 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ercc2O08811 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.99■□□□□ 0.15
Ercc2O08811 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ercc2O08811 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ercc2O08811 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ercc2O08811 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Gm7153-201ENSMUST00000117092 455 ntBASIC15.99■□□□□ 0.15
Ercc2O08811 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.99■□□□□ 0.15
Ercc2O08811 Gm8344-201ENSMUST00000119813 856 ntBASIC15.99■□□□□ 0.15
Ercc2O08811 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.99■□□□□ 0.15
Ercc2O08811 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.99■□□□□ 0.15
Ercc2O08811 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.99■□□□□ 0.15
Ercc2O08811 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.99■□□□□ 0.15
Ercc2O08811 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Grk6-207ENSMUST00000225925 2769 ntBASIC15.99■□□□□ 0.15
Ercc2O08811 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ercc2O08811 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ercc2O08811 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.98■□□□□ 0.15
Ercc2O08811 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Ercc2O08811 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.98■□□□□ 0.15
Ercc2O08811 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ercc2O08811 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.98■□□□□ 0.15
Ercc2O08811 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.98■□□□□ 0.15
Ercc2O08811 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc2O08811 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Ercc2O08811 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.97■□□□□ 0.15
Ercc2O08811 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.97■□□□□ 0.15
Ercc2O08811 Gm11780-201ENSMUST00000136880 516 ntBASIC15.97■□□□□ 0.15
Ercc2O08811 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.97■□□□□ 0.15
Ercc2O08811 Gm4535-201ENSMUST00000182274 558 ntBASIC15.97■□□□□ 0.15
Ercc2O08811 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ercc2O08811 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Gm10355-201ENSMUST00000097146 517 ntBASIC15.97■□□□□ 0.15
Ercc2O08811 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc2O08811 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ercc2O08811 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc2O08811 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc2O08811 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ercc2O08811 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Ercc2O08811 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.96■□□□□ 0.15
Ercc2O08811 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc2O08811 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms