Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ebf3O08791 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.22■□□□□ 0.19
Ebf3O08791 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm8825-201ENSMUST00000182565 998 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm4518-201ENSMUST00000182638 718 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.22■□□□□ 0.19
Ebf3O08791 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ebf3O08791 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.22■□□□□ 0.19
Ebf3O08791 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Ebf3O08791 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf3O08791 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.21■□□□□ 0.19
Ebf3O08791 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ebf3O08791 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.21■□□□□ 0.19
Ebf3O08791 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ebf3O08791 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.21■□□□□ 0.19
Ebf3O08791 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.21■□□□□ 0.19
Ebf3O08791 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.21■□□□□ 0.19
Ebf3O08791 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ebf3O08791 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ebf3O08791 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf3O08791 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ebf3O08791 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Ebf3O08791 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ebf3O08791 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ebf3O08791 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Ebf3O08791 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.2■□□□□ 0.18
Ebf3O08791 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ebf3O08791 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.2■□□□□ 0.18
Ebf3O08791 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.2■□□□□ 0.18
Ebf3O08791 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ebf3O08791 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ebf3O08791 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ebf3O08791 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Ebf3O08791 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.19■□□□□ 0.18
Ebf3O08791 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.19■□□□□ 0.18
Ebf3O08791 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.19■□□□□ 0.18
Ebf3O08791 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ebf3O08791 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms