Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Tcof1O08784 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.27■□□□□ 0.51
Tcof1O08784 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Gm8000-201ENSMUST00000188378 592 ntBASIC18.26■□□□□ 0.51
Tcof1O08784 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.26■□□□□ 0.51
Tcof1O08784 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tcof1O08784 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tcof1O08784 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tcof1O08784 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Tcof1O08784 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.25■□□□□ 0.51
Tcof1O08784 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.25■□□□□ 0.51
Tcof1O08784 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.25■□□□□ 0.51
Tcof1O08784 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Tcof1O08784 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tcof1O08784 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.25■□□□□ 0.51
Tcof1O08784 Gm5364-201ENSMUST00000216789 889 ntBASIC18.25■□□□□ 0.51
Tcof1O08784 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.25■□□□□ 0.51
Tcof1O08784 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tcof1O08784 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tcof1O08784 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.25■□□□□ 0.51
Tcof1O08784 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcof1O08784 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.24■□□□□ 0.51
Tcof1O08784 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tcof1O08784 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.24■□□□□ 0.51
Tcof1O08784 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Tcof1O08784 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tcof1O08784 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.23■□□□□ 0.51
Tcof1O08784 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tcof1O08784 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.23■□□□□ 0.51
Tcof1O08784 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.23■□□□□ 0.51
Tcof1O08784 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.23■□□□□ 0.51
Tcof1O08784 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.23■□□□□ 0.51
Tcof1O08784 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Tcof1O08784 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.23■□□□□ 0.51
Tcof1O08784 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tcof1O08784 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcof1O08784 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms