Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Tubgcp6G5E8P0 Gm45412-201ENSMUST00000210217 2275 ntBASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Gm13453-201ENSMUST00000118708 357 ntBASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 AC125350.2-201ENSMUST00000224737 727 ntBASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Tubgcp6G5E8P0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Gm27680-201ENSMUST00000184192 160 ntBASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 AC135669.1-201ENSMUST00000213585 412 ntBASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Gm42918-201ENSMUST00000199249 1580 ntBASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tubgcp6G5E8P0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Gm2810-201ENSMUST00000118681 990 ntBASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tubgcp6G5E8P0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Gm6973-201ENSMUST00000117080 721 ntBASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tubgcp6G5E8P0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Gm16215-201ENSMUST00000161990 637 ntBASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Gm18187-201ENSMUST00000196476 984 ntBASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Gm15487-201ENSMUST00000122373 465 ntBASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC21.53■■□□□ 1.04
Tubgcp6G5E8P0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms