Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna9G3X8Z7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna9G3X8Z7 Grk6-207ENSMUST00000225925 2769 ntBASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna9G3X8Z7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Gm12497-201ENSMUST00000138778 237 ntBASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Gm19164-201ENSMUST00000210667 640 ntBASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Chrna9G3X8Z7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chrna9G3X8Z7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chrna9G3X8Z7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chrna9G3X8Z7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chrna9G3X8Z7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Chrna9G3X8Z7 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.77■□□□□ 0.27
Chrna9G3X8Z7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Chrna9G3X8Z7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna9G3X8Z7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms