Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.77■□□□□ 0.6
NpcdF8VQB8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.77■□□□□ 0.6
NpcdF8VQB8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.77■□□□□ 0.6
NpcdF8VQB8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NpcdF8VQB8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NpcdF8VQB8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Rpph1-201ENSMUST00000175096 319 ntBASIC18.76■□□□□ 0.59
NpcdF8VQB8 Gm24158-201ENSMUST00000175263 71 ntBASIC18.76■□□□□ 0.59
NpcdF8VQB8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NpcdF8VQB8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.76■□□□□ 0.59
NpcdF8VQB8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.76■□□□□ 0.59
NpcdF8VQB8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.75■□□□□ 0.59
NpcdF8VQB8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.75■□□□□ 0.59
NpcdF8VQB8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Gm25287-201ENSMUST00000103846 110 ntBASIC18.75■□□□□ 0.59
NpcdF8VQB8 Gm22918-201ENSMUST00000103855 110 ntBASIC18.75■□□□□ 0.59
NpcdF8VQB8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NpcdF8VQB8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NpcdF8VQB8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.74■□□□□ 0.59
NpcdF8VQB8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.74■□□□□ 0.59
NpcdF8VQB8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NpcdF8VQB8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.74■□□□□ 0.59
NpcdF8VQB8 Gm27306-201ENSMUST00000183970 107 ntBASIC18.74■□□□□ 0.59
NpcdF8VQB8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NpcdF8VQB8 Haglr-201ENSMUST00000100000 2085 ntBASIC18.73■□□□□ 0.59
NpcdF8VQB8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NpcdF8VQB8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NpcdF8VQB8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Gm18057-201ENSMUST00000208220 503 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms