Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Gm11478-201ENSMUST00000117851 599 ntBASIC21.28■■□□□ 1
Zc3h13E9Q784 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h13E9Q784 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h13E9Q784 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h13E9Q784 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC21.28■■□□□ 1
Zc3h13E9Q784 Rarb-207ENSMUST00000225921 2756 ntBASIC21.28■■□□□ 1
Zc3h13E9Q784 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h13E9Q784 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h13E9Q784 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h13E9Q784 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Zc3h13E9Q784 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Zc3h13E9Q784 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC21.28■■□□□ 1
Zc3h13E9Q784 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Zc3h13E9Q784 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h13E9Q784 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC21.27■■□□□ 1
Zc3h13E9Q784 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC21.27■■□□□ 1
Zc3h13E9Q784 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC21.27■■□□□ 1
Zc3h13E9Q784 CT009510.1-201ENSMUST00000227972 270 ntBASIC21.27■■□□□ 1
Zc3h13E9Q784 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Zc3h13E9Q784 Gm8096-201ENSMUST00000209921 1591 ntBASIC21.27■■□□□ 1
Zc3h13E9Q784 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.27■■□□□ 1
Zc3h13E9Q784 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Zc3h13E9Q784 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC21.27■■□□□ 1
Zc3h13E9Q784 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Zc3h13E9Q784 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h13E9Q784 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Zc3h13E9Q784 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Zc3h13E9Q784 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Gm23984-201ENSMUST00000157139 203 ntBASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Gm8116-201ENSMUST00000182917 1201 ntBASIC21.26■□□□□ 0.99
Zc3h13E9Q784 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h13E9Q784 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Gm22189-201ENSMUST00000103822 86 ntBASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Klk2-ps-201ENSMUST00000205342 571 ntBASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h13E9Q784 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Gm6218-201ENSMUST00000219812 628 ntBASIC21.24■□□□□ 0.99
Zc3h13E9Q784 CT010506.4-201ENSMUST00000225457 351 ntBASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Gm15483-201ENSMUST00000120338 456 ntBASIC21.24■□□□□ 0.99
Zc3h13E9Q784 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Gm8602-201ENSMUST00000184045 607 ntBASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 AY702102-202ENSMUST00000194651 1173 ntBASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Zc3h13E9Q784 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms