Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpsf4lE9Q2N0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4lE9Q2N0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Gm6376-201ENSMUST00000209407 580 ntBASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Rps4l-201ENSMUST00000071745 943 ntBASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Cpsf4lE9Q2N0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Gm11452-201ENSMUST00000122376 690 ntBASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Gm27646-201ENSMUST00000183989 110 ntBASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms