Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Dchs1E9PVD3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Gm27430-201ENSMUST00000184585 107 ntBASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Gm44333-201ENSMUST00000197168 107 ntBASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Dchs1E9PVD3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.72□□□□□ -0.21
Dchs1E9PVD3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Gm12490-201ENSMUST00000120255 560 ntBASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Dchs1E9PVD3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dchs1E9PVD3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
Dchs1E9PVD3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Dchs1E9PVD3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.71□□□□□ -0.22
Dchs1E9PVD3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dchs1E9PVD3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dchs1E9PVD3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dchs1E9PVD3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dchs1E9PVD3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dchs1E9PVD3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Gm43433-201ENSMUST00000196573 481 ntBASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Dchs1E9PVD3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms