Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gm43767-201ENSMUST00000198933 381 ntBASIC13.98□□□□□ -0.17
Shank1D3YZU1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.98□□□□□ -0.17
Shank1D3YZU1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Sybu-209ENSMUST00000228639 4113 ntBASIC13.97□□□□□ -0.17
Shank1D3YZU1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Gm9385-201ENSMUST00000117563 472 ntBASIC13.97□□□□□ -0.17
Shank1D3YZU1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shank1D3YZU1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.96□□□□□ -0.17
Shank1D3YZU1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.96□□□□□ -0.17
Shank1D3YZU1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shank1D3YZU1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Thap2-203ENSMUST00000218989 527 ntBASIC13.96□□□□□ -0.18
Shank1D3YZU1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Shank1D3YZU1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shank1D3YZU1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.95□□□□□ -0.18
Shank1D3YZU1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Gm20553-201ENSMUST00000204205 844 ntBASIC13.95□□□□□ -0.18
Shank1D3YZU1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.95□□□□□ -0.18
Shank1D3YZU1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms