Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC24.38■■□□□ 1.49
Shroom2A2ALU4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Shroom2A2ALU4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Gm15678-201ENSMUST00000117573 960 ntBASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Gm8835-201ENSMUST00000173096 1169 ntBASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Gm10499-201ENSMUST00000174094 934 ntBASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Gm9522-201ENSMUST00000182394 926 ntBASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom2A2ALU4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Gm5566-201ENSMUST00000116118 459 ntBASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Shroom2A2ALU4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 AC238811.3-201ENSMUST00000225422 709 ntBASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom2A2ALU4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Gm7669-201ENSMUST00000210184 1603 ntBASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom2A2ALU4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom2A2ALU4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
Shroom2A2ALU4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Shroom2A2ALU4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Shroom2A2ALU4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Gm10766-202ENSMUST00000194123 606 ntBASIC24.32■■□□□ 1.48
Shroom2A2ALU4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC24.32■■□□□ 1.48
Shroom2A2ALU4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC24.32■■□□□ 1.48
Shroom2A2ALU4 AC159747.1-201ENSMUST00000219903 265 ntBASIC24.32■■□□□ 1.48
Shroom2A2ALU4 AC158529.1-201ENSMUST00000223618 239 ntBASIC24.32■■□□□ 1.48
Shroom2A2ALU4 CT009510.1-201ENSMUST00000227972 270 ntBASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom2A2ALU4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom2A2ALU4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC24.31■■□□□ 1.48
Shroom2A2ALU4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms