Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav12-1A0N8R1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Gm7367-201ENSMUST00000057611 492 ntBASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12-1A0N8R1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-1A0N8R1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms