Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Gm18959-201ENSMUST00000208954 655 ntBASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Gm21559-201ENSMUST00000220638 855 ntBASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Gm8587-201ENSMUST00000076538 843 ntBASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav12d-1A0N8R0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12d-1A0N8R0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav12d-1A0N8R0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Gm11355-201ENSMUST00000121120 306 ntBASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-1A0N8R0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-1A0N8R0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms