Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Gm45328-201ENSMUST00000210942 917 ntBASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc112A0AUP1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc112A0AUP1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Gm15794-201ENSMUST00000120182 631 ntBASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Gm25406-201ENSMUST00000157599 105 ntBASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Gm7367-201ENSMUST00000057611 492 ntBASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc112A0AUP1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms