Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav9d-4A0A0G2JG37 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm7791-201ENSMUST00000219066 539 ntBASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9d-4A0A0G2JG37 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms