Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav13n-1A0A0G2JEU8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm6376-201ENSMUST00000209407 580 ntBASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms