Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Mir6404-201ENSMUST00000183699 94 ntBASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm33142-201ENSMUST00000193913 867 ntBASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-2A0A0G2JDP3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm14859-201ENSMUST00000117752 357 ntBASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm13312-201ENSMUST00000119631 718 ntBASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-2A0A0G2JDP3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms