Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv3A0A0A6YYE2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv3A0A0A6YYE2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Trbv3A0A0A6YYE2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm15378-201ENSMUST00000121894 207 ntBASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Efs-202ENSMUST00000227037 2540 ntBASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv3A0A0A6YYE2 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv3A0A0A6YYE2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv3A0A0A6YYE2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms