Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-5A0A075B6B5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Gm27275-201ENSMUST00000184318 272 ntBASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-5A0A075B6B5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-5A0A075B6B5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms