Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Gm43347-201ENSMUST00000200226 580 ntBASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-4A0A075B6B4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Birc2-201ENSMUST00000054878 378 ntBASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-4A0A075B6B4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.03□□□□□ -0.48
Trav6-4A0A075B6B4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trav6-4A0A075B6B4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav6-4A0A075B6B4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms