Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-7A0A075B6B0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6d-7A0A075B6B0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Phf7-203ENSMUST00000226565 1971 ntBASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6d-7A0A075B6B0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms