Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Gm9013-201ENSMUST00000132939 882 ntBASIC12.84□□□□□ -0.35
Trav18A0A075B656 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Gm6257-201ENSMUST00000163864 910 ntBASIC12.84□□□□□ -0.35
Trav18A0A075B656 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav18A0A075B656 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.83□□□□□ -0.35
Trav18A0A075B656 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav18A0A075B656 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav18A0A075B656 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav18A0A075B656 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav18A0A075B656 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Gm6345-202ENSMUST00000180900 204 ntBASIC12.82□□□□□ -0.36
Trav18A0A075B656 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav18A0A075B656 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms