Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Gm7506-201ENSMUST00000207758 815 ntBASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gm18733-201ENSMUST00000173950 856 ntBASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-1A0A075B644 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms