Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-1A0A075B606 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44357-201ENSMUST00000195897 142 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm19658-201ENSMUST00000196231 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44367-201ENSMUST00000196836 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44350-201ENSMUST00000197197 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44390-201ENSMUST00000197533 144 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44313-201ENSMUST00000198018 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44486-201ENSMUST00000198508 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44314-201ENSMUST00000199263 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44394-201ENSMUST00000199558 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44484-201ENSMUST00000199873 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44466-201ENSMUST00000200264 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm44359-201ENSMUST00000200671 138 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Gm7506-201ENSMUST00000207758 815 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms