Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Gm9013-201ENSMUST00000132939 882 ntBASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-1A0A075B601 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Gm5587-201ENSMUST00000206270 674 ntBASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-1A0A075B601 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-1A0A075B601 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms