Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Gm5493S4R2D1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm5493S4R2D1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm5493S4R2D1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Gm12085-201ENSMUST00000119263 940 ntBASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Gm18666-201ENSMUST00000190039 958 ntBASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm5493S4R2D1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms