Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm2308-201ENSMUST00000166539 1004 ntBASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm5682-201ENSMUST00000173402 505 ntBASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h3Q9Z0Y9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm37153-201ENSMUST00000193637 231 ntBASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h3Q9Z0Y9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h3Q9Z0Y9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Nr1h3Q9Z0Y9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.96■□□□□ 0.3
Nr1h3Q9Z0Y9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nr1h3Q9Z0Y9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.95■□□□□ 0.3
Nr1h3Q9Z0Y9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms