Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Smarcb1Q9Z0H3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarcb1Q9Z0H3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Gm6736-201ENSMUST00000166583 948 ntBASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcb1Q9Z0H3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Gm10175-201ENSMUST00000086013 645 ntBASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcb1Q9Z0H3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gm24513-201ENSMUST00000174964 138 ntBASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcb1Q9Z0H3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcb1Q9Z0H3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms