Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.22□□□□□ -0.45
CcsQ9WU84 Gm11539-201ENSMUST00000119837 557 ntBASIC12.22□□□□□ -0.45
CcsQ9WU84 Gm13436-201ENSMUST00000120418 567 ntBASIC12.22□□□□□ -0.45
CcsQ9WU84 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.22□□□□□ -0.45
CcsQ9WU84 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CcsQ9WU84 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CcsQ9WU84 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CcsQ9WU84 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CcsQ9WU84 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.22□□□□□ -0.45
CcsQ9WU84 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CcsQ9WU84 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CcsQ9WU84 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcsQ9WU84 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
CcsQ9WU84 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Gm12085-201ENSMUST00000119263 940 ntBASIC12.21□□□□□ -0.45
CcsQ9WU84 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.21□□□□□ -0.45
CcsQ9WU84 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.21□□□□□ -0.45
CcsQ9WU84 Gm24841-201ENSMUST00000158676 357 ntBASIC12.21□□□□□ -0.45
CcsQ9WU84 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.21□□□□□ -0.45
CcsQ9WU84 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Gm9987-201ENSMUST00000069768 567 ntBASIC12.21□□□□□ -0.45
CcsQ9WU84 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.21□□□□□ -0.45
CcsQ9WU84 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CcsQ9WU84 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
CcsQ9WU84 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
CcsQ9WU84 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CcsQ9WU84 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
CcsQ9WU84 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CcsQ9WU84 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Gm7977-201ENSMUST00000193787 748 ntBASIC12.2□□□□□ -0.46
CcsQ9WU84 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.2□□□□□ -0.46
CcsQ9WU84 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.2□□□□□ -0.46
CcsQ9WU84 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms