Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col13a1Q9R1N9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col13a1Q9R1N9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Gm13216-201ENSMUST00000117145 591 ntBASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms