Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.75□□□□□ -0.21
Nubp1Q9R060 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.75□□□□□ -0.21
Nubp1Q9R060 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.75□□□□□ -0.21
Nubp1Q9R060 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.75□□□□□ -0.21
Nubp1Q9R060 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Gm27321-201ENSMUST00000185021 205 ntBASIC13.74□□□□□ -0.21
Nubp1Q9R060 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Gm36943-201ENSMUST00000194422 282 ntBASIC13.74□□□□□ -0.21
Nubp1Q9R060 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.74□□□□□ -0.21
Nubp1Q9R060 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.74□□□□□ -0.21
Nubp1Q9R060 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.74□□□□□ -0.21
Nubp1Q9R060 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nubp1Q9R060 Gm44863-201ENSMUST00000207613 1422 ntBASIC13.73□□□□□ -0.21
Nubp1Q9R060 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.73□□□□□ -0.21
Nubp1Q9R060 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.73□□□□□ -0.21
Nubp1Q9R060 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.73□□□□□ -0.21
Nubp1Q9R060 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Nubp1Q9R060 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.72□□□□□ -0.21
Nubp1Q9R060 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 AA543401-201ENSMUST00000164248 1269 ntBASIC13.72□□□□□ -0.21
Nubp1Q9R060 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.72□□□□□ -0.21
Nubp1Q9R060 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms