Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Gm44771-201ENSMUST00000206975 626 ntBASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Clcf1Q9QZM3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Gm6296-201ENSMUST00000222599 943 ntBASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clcf1Q9QZM3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcf1Q9QZM3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clcf1Q9QZM3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clcf1Q9QZM3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clcf1Q9QZM3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcf1Q9QZM3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcf1Q9QZM3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcf1Q9QZM3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.2□□□□□ -0.14
Clcf1Q9QZM3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcf1Q9QZM3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.2□□□□□ -0.14
Clcf1Q9QZM3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Clcf1Q9QZM3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 854.7 ms