Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco4Q9JIS3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Reep4-203ENSMUST00000226563 1444 ntBASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco4Q9JIS3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Gm38285-201ENSMUST00000192928 922 ntBASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Smco4Q9JIS3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms