Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Gm10175-202ENSMUST00000208752 441 ntBASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Asic1-205ENSMUST00000228185 1818 ntBASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccl28Q9JIL2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Gm6623-201ENSMUST00000173570 544 ntBASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl28Q9JIL2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Mir7071-201ENSMUST00000184847 69 ntBASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms