Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClpxQ9JHS4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClpxQ9JHS4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gm13186-201ENSMUST00000118031 316 ntBASIC14.36□□□□□ -0.11
ClpxQ9JHS4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gm36967-201ENSMUST00000193814 266 ntBASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpxQ9JHS4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Gm6659-201ENSMUST00000174752 547 ntBASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpxQ9JHS4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms