Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtp4Q9ER80 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Gm7506-201ENSMUST00000207758 815 ntBASIC14.67□□□□□ -0.06
Rtp4Q9ER80 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.67□□□□□ -0.06
Rtp4Q9ER80 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rtp4Q9ER80 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rtp4Q9ER80 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Mir5131-201ENSMUST00000175426 93 ntBASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.65□□□□□ -0.06
Rtp4Q9ER80 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Rtp4Q9ER80 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms