Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Gm27459-201ENSMUST00000184860 107 ntBASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps35Q9EQH3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.67■□□□□ 0.1
Vps35Q9EQH3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Gm12497-201ENSMUST00000138778 237 ntBASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Gm43347-201ENSMUST00000200226 580 ntBASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Vps35Q9EQH3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms