Protein–RNA interactions for Protein: Q9DBU3

Riok3, Serine/threonine-protein kinase RIO3, mousemouse

Known RBP Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Riok3Q9DBU3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Gm42975-201ENSMUST00000200612 1491 ntBASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Gm44509-201ENSMUST00000205400 1324 ntBASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Gm7961-201ENSMUST00000201338 1436 ntBASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Gm37676-201ENSMUST00000195496 507 ntBASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Gm46436-201ENSMUST00000221851 1294 ntBASIC17.25■□□□□ 0.35
Riok3Q9DBU3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 AC156574.1-201ENSMUST00000227084 452 ntBASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Riok3Q9DBU3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm9575-201ENSMUST00000122140 1339 ntBASIC17.24■□□□□ 0.35
Riok3Q9DBU3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm37160-201ENSMUST00000193081 1689 ntBASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Riok3Q9DBU3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Gm15595-201ENSMUST00000120840 961 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Gm14908-201ENSMUST00000120930 1286 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 AA414768-201ENSMUST00000121924 1257 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Gm27389-201ENSMUST00000183622 195 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Gm18382-201ENSMUST00000194394 582 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Gm21559-201ENSMUST00000220638 855 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 AL589696.1-201ENSMUST00000225711 330 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 AC121567.1-201ENSMUST00000227213 842 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Gm8587-201ENSMUST00000076538 843 ntBASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Riok3Q9DBU3 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms