Protein–RNA interactions for Protein: Q9D4U4

H2al3, H2A histone family member L3, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al3Q9D4U4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Gm45328-201ENSMUST00000210942 917 ntBASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al3Q9D4U4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al3Q9D4U4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al3Q9D4U4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al3Q9D4U4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms