Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Gm26308-201ENSMUST00000157768 69 ntBASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Stag1Q9D3E6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Stag1Q9D3E6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Gm17271-201ENSMUST00000165535 355 ntBASIC18.6■□□□□ 0.57
Stag1Q9D3E6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Stag1Q9D3E6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Gm13597-201ENSMUST00000121239 375 ntBASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stag1Q9D3E6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms