Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Gm6257-201ENSMUST00000163864 910 ntBASIC14.87□□□□□ -0.03
Upk1aQ9D132 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.87□□□□□ -0.03
Upk1aQ9D132 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1aQ9D132 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Gm18959-201ENSMUST00000208954 655 ntBASIC14.86□□□□□ -0.03
Upk1aQ9D132 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Gm7367-201ENSMUST00000057611 492 ntBASIC14.86□□□□□ -0.03
Upk1aQ9D132 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1aQ9D132 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.85□□□□□ -0.03
Upk1aQ9D132 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.85□□□□□ -0.03
Upk1aQ9D132 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.85□□□□□ -0.03
Upk1aQ9D132 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1aQ9D132 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.84□□□□□ -0.03
Upk1aQ9D132 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.84□□□□□ -0.03
Upk1aQ9D132 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.84□□□□□ -0.03
Upk1aQ9D132 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms