Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1bQ9D0N7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 BC037039-201ENSMUST00000192003 2205 ntBASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1bQ9D0N7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Gm29707-201ENSMUST00000196325 491 ntBASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1bQ9D0N7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chaf1bQ9D0N7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Gm21814-202ENSMUST00000203277 873 ntBASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms