Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lysmd1Q9D0E3 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.64■□□□□ 0.26
Lysmd1Q9D0E3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Lysmd1Q9D0E3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lysmd1Q9D0E3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Gm15236-201ENSMUST00000117309 379 ntBASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Gm9522-201ENSMUST00000182394 926 ntBASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Gm18056-201ENSMUST00000207670 568 ntBASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Gm18061-201ENSMUST00000208350 562 ntBASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Gm18063-201ENSMUST00000208529 568 ntBASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Gm18052-201ENSMUST00000208750 559 ntBASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lysmd1Q9D0E3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Gm13226-201ENSMUST00000117838 404 ntBASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Gm15483-201ENSMUST00000120338 456 ntBASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Gm38241-201ENSMUST00000192641 898 ntBASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd1Q9D0E3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Snora78-201ENSMUST00000158630 128 ntBASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd1Q9D0E3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms