Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Gm5828-201ENSMUST00000071842 1860 ntBASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Mrpl55Q9CZ83 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Gm33142-201ENSMUST00000193913 867 ntBASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Mrpl55Q9CZ83 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Mir8112-201ENSMUST00000184382 131 ntBASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Gm7370-201ENSMUST00000219471 767 ntBASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Mrpl55Q9CZ83 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms