Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim13Q9CYB0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim13Q9CYB0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Gm11336-201ENSMUST00000118168 334 ntBASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim13Q9CYB0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms