Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Gm9987-201ENSMUST00000069768 567 ntBASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssr1Q9CY50 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.02■□□□□ 0.31
Ssr1Q9CY50 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ssr1Q9CY50 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ssr1Q9CY50 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
Ssr1Q9CY50 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ssr1Q9CY50 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Mypopos-202ENSMUST00000205975 2321 ntBASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.01■□□□□ 0.31
Ssr1Q9CY50 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ssr1Q9CY50 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ssr1Q9CY50 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ssr1Q9CY50 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17■□□□□ 0.31
Ssr1Q9CY50 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ssr1Q9CY50 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ssr1Q9CY50 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Gm10052-201ENSMUST00000168019 960 ntBASIC17■□□□□ 0.31
Ssr1Q9CY50 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ssr1Q9CY50 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17■□□□□ 0.31
Ssr1Q9CY50 Gm7729-201ENSMUST00000050143 801 ntBASIC17■□□□□ 0.31
Ssr1Q9CY50 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ssr1Q9CY50 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms