Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnaseh2aQ9CWY8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnaseh2aQ9CWY8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnaseh2aQ9CWY8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rnaseh2aQ9CWY8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnaseh2aQ9CWY8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnaseh2aQ9CWY8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Rnaseh2aQ9CWY8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.58■□□□□ 0.57
Rnaseh2aQ9CWY8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnaseh2aQ9CWY8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm27533-201ENSMUST00000183800 152 ntBASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm18766-201ENSMUST00000189811 808 ntBASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnaseh2aQ9CWY8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm29667-201ENSMUST00000190817 490 ntBASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnaseh2aQ9CWY8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 AY702102-202ENSMUST00000194651 1173 ntBASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnaseh2aQ9CWY8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms