Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Mir6404-201ENSMUST00000183699 94 ntBASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf135Q9CWS1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf135Q9CWS1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf135Q9CWS1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Mzt1-203ENSMUST00000227948 952 ntBASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf135Q9CWS1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf135Q9CWS1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms